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3 | 3 | # vi: set ft=python sts=4 ts=4 sw=4 et:
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4 | 4 | """Top-level namespace for ants."""
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5 | 5 |
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6 |
| -# Registraiton programs |
| 6 | +# Registration programs |
7 | 7 | from .registration import (
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8 | 8 | ANTS,
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9 |
| - Registration, |
10 |
| - RegistrationSynQuick, |
11 | 9 | CompositeTransformUtil,
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12 | 10 | MeasureImageSimilarity,
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| 11 | + Registration, |
| 12 | + RegistrationSynQuick, |
13 | 13 | )
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14 | 14 |
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15 | 15 | # Resampling Programs
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22 | 22 |
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23 | 23 | # Segmentation Programs
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24 | 24 | from .segmentation import (
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| 25 | + AntsJointFusion, |
25 | 26 | Atropos,
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26 |
| - LaplacianThickness, |
27 |
| - N4BiasFieldCorrection, |
28 |
| - JointFusion, |
29 |
| - CorticalThickness, |
30 | 27 | BrainExtraction,
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| 28 | + CorticalThickness, |
31 | 29 | DenoiseImage,
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32 |
| - AntsJointFusion, |
| 30 | + JointFusion, |
| 31 | + LaplacianThickness, |
| 32 | + N4BiasFieldCorrection, |
33 | 33 | )
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34 | 34 |
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35 | 35 | # Visualization Programs
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36 | 36 | from .visualization import ConvertScalarImageToRGB, CreateTiledMosaic
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37 | 37 |
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38 | 38 | # Utility Programs
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39 | 39 | from .utils import (
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| 40 | + AffineInitializer, |
| 41 | + AI, |
40 | 42 | AverageAffineTransform,
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41 | 43 | AverageImages,
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42 |
| - MultiplyImages, |
43 |
| - CreateJacobianDeterminantImage, |
44 |
| - AffineInitializer, |
45 | 44 | ComposeMultiTransform,
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| 45 | + CreateJacobianDeterminantImage, |
| 46 | + ImageMath, |
46 | 47 | LabelGeometry,
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| 48 | + MultiplyImages, |
| 49 | + ResampleImageBySpacing, |
| 50 | + ThresholdImage, |
47 | 51 | )
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| 52 | + |
| 53 | +__all__ = [ |
| 54 | + "AffineInitializer", |
| 55 | + "AI", |
| 56 | + "ANTS", |
| 57 | + "AntsJointFusion", |
| 58 | + "ApplyTransforms", |
| 59 | + "ApplyTransformsToPoints", |
| 60 | + "Atropos", |
| 61 | + "AverageAffineTransform", |
| 62 | + "AverageImages", |
| 63 | + "BrainExtraction", |
| 64 | + "ComposeMultiTransform", |
| 65 | + "CompositeTransformUtil", |
| 66 | + "ConvertScalarImageToRGB", |
| 67 | + "CorticalThickness", |
| 68 | + "CreateJacobianDeterminantImage", |
| 69 | + "CreateTiledMosaic", |
| 70 | + "DenoiseImage", |
| 71 | + "ImageMath", |
| 72 | + "JointFusion", |
| 73 | + "LabelGeometry", |
| 74 | + "LaplacianThickness", |
| 75 | + "MeasureImageSimilarity", |
| 76 | + "MultiplyImages", |
| 77 | + "N4BiasFieldCorrection", |
| 78 | + "Registration", |
| 79 | + "RegistrationSynQuick", |
| 80 | + "ResampleImageBySpacing", |
| 81 | + "ThresholdImage", |
| 82 | + "WarpImageMultiTransform", |
| 83 | + "WarpTimeSeriesImageMultiTransform", |
| 84 | +] |
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