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[FIX] 3dUndump interface #2224

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Merged
merged 1 commit into from
Oct 12, 2017
Merged

[FIX] 3dUndump interface #2224

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4 changes: 3 additions & 1 deletion nipype/interfaces/afni/tests/test_auto_Undump.py
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Original file line number Diff line number Diff line change
Expand Up @@ -32,11 +32,13 @@ def test_Undump_inputs():
num_threads=dict(nohash=True,
usedefault=True,
),
orient=dict(argstr='-orient %s',
),
out_file=dict(argstr='-prefix %s',
name_source='in_file',
),
outputtype=dict(),
srad=dict(argstr='-srad -%f',
srad=dict(argstr='-srad %f',
),
terminal_output=dict(deprecated='1.0.0',
nohash=True,
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19 changes: 13 additions & 6 deletions nipype/interfaces/afni/utils.py
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Expand Up @@ -2096,13 +2096,20 @@ class UndumpInputSpec(AFNICommandInputSpec):
desc='radius in mm of the sphere that will be filled about each input '
'(x,y,z) or (i,j,k) voxel. If the radius is not given, or is 0, '
'then each input data line sets the value in only one voxel.',
argstr='-srad -%f')
srad = traits.Tuple(
argstr='-srad %f')
orient = traits.Tuple(
traits.Enum('R', 'L'), traits.Enum('A', 'P'), traits.Enum('I', 'S'),
desc='radius in mm of the sphere that will be filled about each input '
'(x,y,z) or (i,j,k) voxel. If the radius is not given, or is 0, '
'then each input data line sets the value in only one voxel.',
argstr='-srad -%f')
desc='Specifies the coordinate order used by -xyz. '
'The code must be 3 letters, one each from the pairs '
'{R,L} {A,P} {I,S}. The first letter gives the '
'orientation of the x-axis, the second the orientation '
'of the y-axis, the third the z-axis: '
'R = right-to-left L = left-to-right '
'A = anterior-to-posterior P = posterior-to-anterior '
'I = inferior-to-superior S = superior-to-inferior '
'If -orient isn\'t used, then the coordinate order of the '
'-master (in_file) dataset is used to interpret (x,y,z) inputs.',
argstr='-orient %s')
head_only = traits.Bool(
desc='create only the .HEAD file which gets exploited by '
'the AFNI matlab library function New_HEAD.m',
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